Creating ISA content with a Sample and Assay planΒΆ

The ISA API provides a set of classes that you can use to plan a study, in terms of sample collection and assay run patterns. Objects of these classes can then be used to dump ISA-Tab or ISA-JSON templates corresponding to your study design. They are found in the isatools.create.models module.

Take a look at the isatools-notebooks GitHub repository for Jupyter Notebook examples of using the planning objects.